PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN22077.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 327aa    MW: 35603.2 Da    PI: 6.558
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN22077.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92e-09176220554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  KHN22077.1 176 HSIAERLRRERIAERMKALQELVPSiN------KTDRAAMLDEIVDYVKFL 220
                 99***********************77......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.81E-10169225No hitNo description
SuperFamilySSF474593.79E-15169230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.126171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-14173231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-7176220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-11177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MAGNSSSEGL VDDFFEQILA VPEAAAFRGA AGLMPLGLNL EQAGFLRHQH QINVDDVVHV  60
NVDDATIHHH HLTLHNNTTS SSPSSTAPIT DRDSMHMRGL FSAFGQLHTP TLAHSIRPTL  120
PSPPPPRQPQ LHLHHHNNQQ FQGQPAAAPA SMAAMPQPPG IRPRVRARRG QATDPHSIAE  180
RLRRERIAER MKALQELVPS INKTDRAAML DEIVDYVKFL RLQVKVLSMS RLGGAGAVAQ  240
LVADVPLSAV EGDQDIEGVS NEQAWDKWSN DGTEQQVAKL MEEDVGAAMQ FLQSKALCIM  300
PISLASSIFC MPQSEASTGI KPESNSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180185RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1416381e-171BT141638.1 Lotus japonicus clone JCVI-FLLj-6C12 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006589182.10.0PREDICTED: transcription factor UNE12-like isoform X4
SwissprotO227686e-77UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A0B2QQU90.0A0A0B2QQU9_GLYSO; Transcription factor UNE12
STRINGGLYMA10G30430.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112053239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.33e-63bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]